Air Fryer Everything Bagel Bites in 22 Minutes

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Golden and crispy with that classic everything seasoning flavor—these air fryer bagel bites are a keto-friendly comfort food ready in just 22 minutes.

emily rose carter for recipes by clare
By Emily Rose Carter
Updated on Wed, 16 Jul 2025 00:49:23 GMT

Air Fryer Everything Bagel Bites transform simple pantry ingredients into crispy, protein-packed perfection that’ll have you reaching for seconds. There’s something magical about that first bite – the golden exterior giving way to a tender, chewy center, all topped with that irresistible everything seasoning blend.

I still remember the first time I made these little gems in my own kitchen. It was one of those Sunday mornings when I was craving something comforting but didn’t want to derail my keto goals. I had some almond flour sitting in my pantry and a container of Greek yogurt in the fridge, and somehow my brain connected the dots. The result? These incredible Air Fryer Everything Bagel Bites that taste like they came from a New York deli, just like our New York-Style Bagels.

What makes these bites so special is their versatility. They’re perfect for breakfast with a smear of cream cheese, ideal as an afternoon snack, or even great as a side for soup. The combination of almond flour and Greek yogurt creates this amazing texture, much like in our popular Greek Yogurt Bagel Recipe that’s both satisfying and guilt-free. Plus, they freeze beautifully, so you can make a double batch and have them ready whenever a craving strikes. Ready to try it?

Why You’ll Love This Air Fryer Everything Bagel Bites Recipe

These Air Fryer Everything Bagel Bites have become a weekly staple in my kitchen, and I know they’ll win you over too. There’s something so satisfying about creating bakery-quality treats at home with just a few simple ingredients.

  • Ready in just 22 minutes – Perfect for busy mornings or when you need a quick snack
  • Keto-friendly with only 70 calories per bite – You can enjoy these guilt-free treats without breaking your low-carb goals
  • Made with pantry staples – Almond flour, Greek yogurt, and everything seasoning are all you really need
  • Crispy outside, tender inside – The air fryer creates that perfect golden texture every single time
  • Customizable with add-ins – From cheese to herbs, you can make them your own
  • Freezer-friendly – Freezer-friendly – Make a big batch and store them for whenever cravings hit, just like we do with our High Protein Bagel Bites.

This Air Fryer Everything Bagel Bites recipe is more than just a snack – it’s a little piece of comfort that fits perfectly into your healthy lifestyle.

Ingredient Note List

Almond Flour: I always use finely ground almond flour because it creates the perfect tender texture and adds a subtle nutty flavor that complements the everything seasoning beautifully.

Greek Yogurt: Plain Greek yogurt is essential here as it provides moisture and protein while helping bind the dough together without adding extra carbs.

Baking Powder: This small amount gives the Air Fryer Everything Bagel Bites a light, airy texture and helps them puff up slightly during cooking.

Everything but the Bagel Seasoning: The star of the show – this blend of sesame seeds, poppy seeds, garlic, and onion creates that classic bagel shop flavor we all crave.

Oil Spray: I prefer avocado oil spray because it has a high smoke point and helps achieve that golden, crispy exterior without adding unnecessary calories.

Flax Seeds: These optional add-ins boost the fiber content and add a pleasant nutty crunch that pairs wonderfully with the everything seasoning.

Chia Seeds: When added, they provide omega-3 fatty acids and a subtle pop of texture that makes each bite more interesting.

Grated Cheese: Adding cheese creates extra richness and helps the bites hold together even better while adding that irresistible melted cheese factor.

How to Cook Air Fryer Everything Bagel Bites

Step 1. I always start by preheating my air fryer to 350°F for about 3 minutes – this ensures even cooking and that perfect golden color.

Step 2. In a mixing bowl, I combine the almond flour and baking powder, whisking them together to eliminate any lumps that might affect the texture.

Step 3. My grandmother always told me to mix wet and dry ingredients separately first, so I add the Greek yogurt to the flour mixture and stir until a soft dough forms.

Step 4. I’ve found that letting the dough rest for 2-3 minutes helps it come together better and makes it easier to shape into uniform bites.

Step 5. Using slightly damp hands, I roll the dough into 10 equal portions – each about the size of a ping pong ball for consistent cooking.

Step 6. I lightly spray each bite with oil spray and then roll them in the everything seasoning — a trick I also use in my simple Air Fryer Bagel Bites recipe.

Step 7. My husband prefers when I arrange them in a single layer in the air fryer basket, leaving some space between each bite for proper air circulation.

Step 8. I usually cook them for 12 minutes, flipping them halfway through to ensure even browning on all sides.

Step 9. The final step is checking that they’re golden brown and firm to the touch – if they need a bit more time, I add 1-2 minutes until they’re perfect.

How to Store & Reheat

I usually store any leftover Air Fryer Everything Bagel Bites in an airtight container in the refrigerator, where they stay fresh for up to 5 days. Make sure they’re completely cooled before storing to prevent condensation from making them soggy.

If you’d like to freeze them, I recommend placing them in a single layer on a baking sheet first, then transferring to a freezer-safe container once frozen. They keep well for up to 3 months and make reheating quick and convenient.

For best results, I like to reheat these bites in the air fryer at 300°F for 2-3 minutes to restore that crispy exterior. You can also use a toaster oven at 350°F for 3-4 minutes, though the air fryer method gives you that fresh-from-the-fryer texture.

What to Serve with Air Fryer Everything Bagel Bites

Cream Cheese: The classic pairing that never fails – the rich, tangy cream cheese perfectly balances the savory everything seasoning and creates that authentic bagel shop experience.

Avocado Slices: Fresh avocado adds creamy richness and healthy fats that complement the protein-packed bites, making them even more satisfying.

Smoked Salmon: For a more elegant brunch presentation, these bites pair beautifully with smoked salmon and a sprinkle of capers for that New York deli vibe.

Greek Yogurt Dip: A dollop of plain Greek yogurt mixed with herbs like dill or chives creates a light, protein-rich dip that enhances the Mediterranean flavors — or serve with our Bagel Dip Recipe for an extra flavorful twist.

Everything Bagel Hummus: In my kitchen, I often serve these with store-bought everything bagel hummus or alongside our Chopped Pickle Bagel for a crunchy contrast.

Fresh Berries: A handful of strawberries or blueberries adds natural sweetness and creates a balanced breakfast or snack that satisfies both savory and sweet cravings.

FAQs

Can I make Air Fryer Everything Bagel Bites without Greek yogurt?

I recommend sticking with Greek yogurt for the best texture, but you can substitute with sour cream or cream cheese if needed – just use a bit less since they’re thicker than yogurt.

Why are my bagel bites turning out dry?

To avoid this, try adding an extra tablespoon of Greek yogurt to the dough and make sure not to overcook them – they should be golden but still tender inside.

Can I use regular flour instead of almond flour?

Many home cooks find that regular flour works, but you’ll need to adjust the liquid since wheat flour absorbs differently, and the bites won’t be keto-friendly anymore.

How do I know when my Air Fryer Everything Bagel Bites are done?

I look for a golden brown color and they should feel firm to the touch – if they’re still soft or pale, give them another 1-2 minutes in the air fryer.

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Air Fryer Everything Bagel Bites in 22 Minutes

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Keto-friendly everything bagel bites made with almond flour and Greek yogurt, air-fried to golden perfection. Perfect as a snack or breakfast.

  • Author: Emily Rose Carter
  • Prep Time: 10 minutes
  • Cook Time: 12 minutes
  • Total Time: 22 minutes
  • Yield: 10 bagel bites 1x
  • Category: Snacks
  • Method: Air Fryer
  • Cuisine: American

Ingredients

Scale
  • 1 cup almond flour
  • 1/2 cup Greek yogurt
  • 1/2 tsp baking powder
  • Oil spray (avocado or olive oil)
  • Everything but the Bagel Sesame Seasoning Blend
  • Optional: 1 tbsp flax seeds
  • Optional: 1 tbsp chia seeds
  • Optional: 1/4 cup grated cheese
  • Optional: 1/2 tsp garlic powder
  • Optional: 1/4 tsp cayenne pepper
  • Optional: 1/2 tsp onion powder
  • Optional: 1-2 tsp chopped herbs (dill, parsley, chives, or green onion)

Instructions

  1. In a bowl, mix almond flour, baking powder, Greek yogurt, and any desired optional add-ins to form dough.
  2. Divide dough into 10 equal pieces and shape into balls.
  3. Spray each ball lightly with oil spray.
  4. Coat each ball with Everything but the Bagel Seasoning Blend.
  5. Place in an air fryer basket in a single layer.
  6. Air fry at 360°F for 10–12 minutes until golden and cooked through.

Notes

  • Let cool slightly before serving.
  • Great paired with cream cheese or enjoyed alone.
  • Store leftovers in an airtight container in the fridge for up to 3 days.

Nutrition

  • Serving Size: 1 bagel bite
  • Calories: 70 kcal
  • Sugar: 1g
  • Sodium: 100mg
  • Fat: 5g
  • Saturated Fat: 1.5g
  • Unsaturated Fat: 3g
  • Trans Fat: 0g
  • Carbohydrates: 4g
  • Fiber: 1g
  • Protein: 3g
  • Cholesterol: 5mg

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