Amazing 2-Ingredient Air Fryer Bagels

Air fryer bagels are about to become your new breakfast obsession! These incredible two-ingredient wonders deliver all the chewy satisfaction of traditional bagels without the fuss, much like our 2-Ingredient Protein Bagels. I’ve been making these protein-packed beauties in my kitchen for months, and they never fail to impress.

There’s something magical about the smell of fresh bagels filling your kitchen on a Sunday morning. It takes me back to weekend mornings at Grandma’s house, where she’d always have something wonderful baking. But let’s be honest—most of us don’t have time for traditional bagel-making with its overnight rises and boiling water baths.

That’s exactly why I fell in love with this simple air fryer method. Using just Greek yogurt and self-rising flour, these bagels come together in minutes, not hours. The air fryer creates that perfect golden exterior while keeping the inside wonderfully chewy, just like in our Air Fryer Breakfast Ideas roundup. I’ve tested this recipe countless times in my own kitchen, tweaking the technique until it was absolutely foolproof.

What makes these even better is the protein boost from the yogurt—each bagel packs about 159 calories and a solid dose of protein to keep you satisfied all morning. Whether you’re rushing to work or enjoying a leisurely weekend breakfast, these air fryer bagels deliver homemade taste without the time commitment. Ready to try it?

Why You’ll Love This Two-Ingredient Air Fryer Bagel Recipe

These protein bagels have become a staple in my kitchen because they solve that age-old problem of wanting fresh, homemade bagels without spending hours in the kitchen. The technique comes from my love of simple, wholesome ingredients that deliver maximum flavor and nutrition.

• Quick and foolproof – Ready in just 21 minutes with minimal prep work
• High in protein – Each bagel contains substantial protein from Greek yogurt to fuel your morning
• Customizable toppings – Perfect canvas for everything bagel seasoning, sesame seeds, or sweet variations
• Budget-friendly ingredients – Uses pantry staples you likely already have on hand
• Perfectly chewy texture – The air fryer creates that ideal bagel bite without boiling or complicated techniques
• Great for meal prep – Make a batch and store for quick breakfast options all week

Air Fryer vs Traditional Bagels: Health Comparison

Nutritional Factor	MY Air Fryer Protein Bagels	Traditional Store-Bought Bagels
Calories	159 per bagel	250-350+ per bagel
Protein	High (from Greek yogurt)	Lower (flour-based only)
Size/Portion	Smaller, reasonable serving	Often oversized (3-4 bread slices equivalent)
Sodium	Low (~56mg per bagel)	High (300-600mg per bagel)
Added Fats/Oils	None	Often contains oils
Preservatives	None	Common in store-bought
Ingredients	2 main ingredients	10+ ingredients typical
Cooking Method	Air fried (no oil)	Boiled then baked
Prep Time	21 minutes total	Hours (or store-bought)
Satiety	Higher protein = longer fullness	Higher carbs = shorter fullness

Ingredient Notes

Plain Skyr Yogurt: I always recommend using thick, plain Skyr yogurt because it provides the protein boost and creates the perfect chewy texture that makes these bagels so satisfying.

Self-Rising Flour: This magical ingredient contains the leavening agents needed to give your bagels that perfect rise and fluffy interior without any extra steps.

Sea Salt: A pinch of sea salt enhances all the flavors and balances the slight tanginess from the yogurt beautifully.

Large Egg: The egg wash creates that gorgeous golden-brown finish and helps seasonings stick to the surface of your air fryer bagels.

Everything Bagel Seasoning: My favorite topping choice because it adds that classic bagel shop flavor with garlic, onion, sesame seeds, and poppy seeds in every bite.

Sesame Seeds: These add a lovely nutty crunch and that traditional bagel appearance that makes breakfast feel special.

How to Make Air Fryer Bagels

Step 1. I usually start by preheating my air fryer to 350°F while I prepare the dough—this ensures even cooking from the moment the bagels go in.

Step 2. In a large bowl, I mix the yogurt, flour, and sea salt with a spoon until it’s roughly combined, then use my hands to bring it together into a dough ball.

Step 3. My grandma always said to knead dough on a well-floured surface, and she was right—it prevents sticking and creates a smoother texture.

Step 4. I’ve found that dividing the dough into 4 equal portions gives you perfectly sized bagels that cook evenly in the air fryer.

Step 5. When forming the holes, I gently flatten each ball and use my finger to poke through the center, then stretch it slightly—the holes will shrink a bit during cooking.

Step 6. I always brush both sides with egg wash because it creates that beautiful golden color and helps seasonings stick perfectly.

Step 7. Lining the air fryer basket with parchment paper prevents sticking and makes cleanup so much easier.

Step 8. My husband prefers when I place them seed-side down first—it gives the toppings time to set while the bottom cooks.

Step 9. After 8 minutes, I flip them carefully and cook for another 8 minutes until they’re golden brown and sound hollow when tapped.

Step 10. I recommend letting them cool for 5 minutes before slicing—this helps the interior set and prevents them from becoming gummy.

How to Store & Reheat

I usually store any leftover bagels in an airtight container at room temperature, where they stay fresh for up to 3 days. Make sure they’re completely cool before storing to prevent moisture buildup that can make them soggy.

For longer storage, I recommend wrapping each bagel individually in plastic wrap and placing them in a freezer bag. They keep well in the freezer for up to 2 months and taste just as good when reheated properly.

For best results, I like to reheat these bagels by slicing them in half and toasting them in a regular toaster or toaster oven until warmed through. You can also reheat whole bagels in the air fryer at 300°F for 2-3 minutes. In my experience, avoiding the microwave keeps the texture from becoming chewy.

What to Serve with Air Fryer Protein Bagels

Cream Cheese and Fresh Berries: The creamy richness pairs beautifully with the tangy yogurt flavor in the bagels, especially when paired with our Top 5 Cream Cheeses for Bagels.

Avocado and Everything Seasoning: This combination creates a satisfying, healthy breakfast that’s packed with healthy fats and protein—try it with our Greek Yogurt Bagels (No Boiling).

Smoked Salmon and Capers: For a more sophisticated brunch option, this classic pairing shines on New York Style Bagels.Avocado and Everything Seasoning: This combination creates a satisfying, healthy breakfast that’s packed with healthy fats and protein—try it with our Greek Yogurt Bagels (No Boiling).

Almond Butter and Sliced Banana: The nutty flavor complements the slight tanginess of the bagels; it’s also delicious on our Cinnamon Sugar Bagels.

Scrambled Eggs and Cheese: Turn your bagel into a complete breakfast sandwich by adding fluffy eggs—especially tasty with our Quick Protein Bagels.

Honey and Cinnamon: For a sweet treat, this combo works beautifully on Strawberry Bagels that kids especially love.

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