Air Fryer Bagel Bites Snack in 4 Minutes

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Homemade Air Fryer Bagel Bites, ready in just 4 minutes—crispy, cheesy, and bursting with nostalgic snack joy straight from your kitchen.

emily rose carter for recipes by clare
By Emily Rose Carter
Updated on Mon, 14 Jul 2025 20:49:40 GMT

Bagel bite air fryer cooking transforms a simple snack into something extraordinary. I discovered this game-changing method when my family was craving that perfect combination of crispy bagel and melty cheese without the wait time of frozen versions.

There’s something magical about the sound of cheese bubbling in the air fryer – it takes me back to after-school snacks in my childhood kitchen. The difference between homemade and store-bought bagel bites became crystal clear the first time I made these from scratch. My kids now request these weekly, and I love how quickly I can whip up a batch using just three simple ingredients, especially when I use the same base as our Mini Bagels. The air fryer creates that perfect golden crust while keeping the inside soft and cheesy, exactly like those nostalgic memories but so much better. Ready to try this foolproof method that’s about to become your new favorite snack?

Why You’ll Love This Air Fryer Bagel Bites Recipe

This bagel bite air fryer recipe brings together convenience and homemade goodness in the most delicious way. I’ve been perfecting this technique in my kitchen, and it consistently delivers that perfect crispy-cheesy combination my family craves.

  • Ready in just 4 minutes – faster than preheating your oven and way quicker than frozen versions
  • Uses everyday ingredients – mini bagels, marinara sauce, and mozzarella cheese that you probably already have — similar to what we use in our Mini Pizza Bagels.
  • Perfectly crispy texture – the air fryer creates golden edges while keeping the cheese perfectly melted
  • Easily customizable – add pepperoni, sausage, or any pizza toppings your family loves
  • Kid-friendly favorite – my children choose these over store-bought versions every single time
  • Budget-friendly option – costs a fraction of frozen bagel bites and tastes infinitely better

“This recipe is more than just a snack – it’s a quick solution for busy afternoons, just like our grab-and-go High-Protein Bagel Bites, and a canvas for creativity in the kitchen.”

Ingredient Note List

Mini Bagels: I always recommend using fresh mini bagels from the bakery section because they hold their shape better and create the perfect crispy-chewy texture when air fried.

Marinara Sauce: A good quality marinara sauce makes all the difference in flavor, and I prefer using one with herbs and garlic for that authentic pizza taste.

Shredded Mozzarella Cheese: Freshly shredded mozzarella melts more evenly than pre-shredded varieties and creates that perfect stretchy, golden cheese layer.

Mini Pepperoni: This optional topping adds that classic pizza flavor and a bit of satisfying saltiness that complements the cheese beautifully.

Crumbled Sausage: Pre-cooked sausage crumbles bring a hearty, savory element that makes these bagel bites more filling and flavorful.

How to Cook Air Fryer Bagel Bites

Step 1. I always start by cutting my mini bagels in half horizontally to create the perfect base for toppings and ensure even cooking in the air fryer.

Step 2. I spread about a tablespoon of marinara sauce on each bagel half, leaving a small border around the edges to prevent overflow during cooking.

Step 3. My family prefers when I sprinkle the mozzarella cheese generously over the sauce, making sure each bite gets that perfect cheese-to-sauce ratio.

Step 4. I’ve found that adding any optional toppings like pepperoni or sausage at this stage prevents them from burning and keeps them perfectly positioned.

Step 5. I carefully place the prepared bagel bites in the air fryer basket, making sure they don’t overlap for even cooking results.

Step 6. Setting the air fryer to 350°F and cooking for exactly 4 minutes gives me that perfect golden cheese with crispy edges every time.

Step 7. I usually let them cool for about 30 seconds before serving because the cheese gets incredibly hot and needs a moment to set.

How to Store & Reheat

I usually store any leftover bagel bites in an airtight container in the refrigerator, where they stay fresh for up to 3 days. Make sure they’re completely cooled before storing to prevent condensation from making them soggy.

In my experience, freezing works well if you want to prep ahead – wrap each bagel bite individually in foil and store in a freezer bag for up to 1 month. This makes them perfect for quick snacks later on.

For best results, I recommend reheating bagel bites in the air fryer at 350°F for 1-2 minutes to restore that crispy texture. You can also use the microwave for 20-30 seconds, but the air fryer method keeps them much crispier and more enjoyable.

What to Serve With Air Fryer Bagel Bites

Fresh Garden Salad: A light salad with vinaigrette dressing provides a refreshing contrast to the rich, cheesy bagel bites and adds healthy greens to balance the meal.

Crispy Sweet Potato Fries: The natural sweetness of sweet potato fries complements the savory bagel bites perfectly, or try them alongside our Pumpkin Bagels for a seasonal twist.

Cherry Tomatoes with Ranch: Fresh cherry tomatoes offer a burst of freshness that cuts through the richness, while ranch dressing ties everything together nicely.

Apple Slices with Peanut Butter: This classic pairing adds a sweet, crunchy element that makes the bagel bites feel like a more complete snack or light meal.

Veggie Chips: Baked veggie chips provide extra crunch and nutrition while maintaining that fun, casual snack vibe — just like our Dunkin Stuffed Bagel Minis.

Homemade Fruit Smoothie: A cold, creamy smoothie balances the warm, cheesy bagel bites and pairs well with our Blueberry Bagel Recipe for a wholesome finish.

FAQs

How long do you cook bagel bites in the air fryer?

I recommend cooking bagel bites in the air fryer at 350°F for exactly 4 minutes to achieve that perfect golden cheese with crispy edges.

Can I cook bagel in the air fryer?

Absolutely! Regular bagels work wonderfully in the air fryer – just slice them in half and toast for 2-3 minutes at 350°F for a perfectly crispy exterior and soft interior.

How to cook frozen bagel in an air fryer?

I usually cook frozen bagels by first thawing them slightly, then air frying at 320°F for 3-4 minutes to prevent the outside from burning while the inside heats through.

How long to cook frozen pizza bites in an air fryer?

Frozen pizza bites typically need 5-6 minutes at 350°F in the air fryer, but I always check at 4 minutes and adjust based on your preferred level of crispiness.

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Quick and delicious homemade bagel bites made in the air fryer with marinara, mozzarella, and your favorite toppings.

  • Author: Emily Rose Carter
  • Prep Time: 10 minutes
  • Cook Time: 4 minutes
  • Total Time: 14 minutes
  • Yield: 10 bites 1x
  • Category: Main Course, Snack
  • Method: Air Fryer
  • Cuisine: American
  • Diet: Vegetarian

Ingredients

Scale
  • 5 mini bagels, cut in half
  • ⅓ cup marinara sauce
  • ½ cup shredded mozzarella cheese (freshly shredded recommended)
  • Optional: Mini pepperoni
  • Optional: Crumbled sausage

Instructions

  1. Cut the mini bagels in half and spread marinara sauce on each half.
  2. Sprinkle shredded mozzarella cheese over the sauce and add any desired toppings.
  3. Place the prepared bagel halves in the air fryer basket.
  4. Set the air fryer to 350°F and cook for 4 minutes.
  5. Remove from the air fryer and enjoy immediately.

Notes

  • Use freshly shredded mozzarella for best results.
  • Homemade marinara enhances flavor.
  • Customize with your favorite toppings.

Nutrition

  • Serving Size: 2 bites
  • Calories: 150 kcal
  • Sugar: 2g
  • Sodium: 320mg
  • Fat: 6g
  • Saturated Fat: 3g
  • Unsaturated Fat: 2g
  • Trans Fat: 0g
  • Carbohydrates: 18g
  • Fiber: 1g
  • Protein: 6g
  • Cholesterol: 15mg

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